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Postdoc in infection biology, immunology and metabolomics

Postdoc in infection biology, immunology and metabolomics

Denmark 28 Feb 2021
Aarhus University AU

Aarhus University AU

State University, Browse similar opportunities

OPPORTUNITY DETAILS

Total reward
0 $
State University
Area
Host Country
Deadline
28 Feb 2021
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Opportunity type
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Opportunity funding
Full funding
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This opportunity is destined for all countries
Eligible Region
All Regions

The Department of Biomedicine at Faculty of Health at Aarhus University invites applications for a position as Postdoc in the field of infection biology and immunology combined with metabolomics as per 1 May 2021 or as soon as possible thereafter. The position is a 3 year full-time position.

We offer a vibrant international research environment where English is the preferred language in the laboratory, at meetings and at seminars. The Department employs some 450 people and covers a range of research areas within Biomedicine. We contribute to the Bachelor’s degree programs in medicine, molecular medicine, odontology and the Master’s degree programs in biomedical engineering and medical chemistry. Our infrastructure is well developed with modern laboratories, core and animal facilities. You will work in the brand new ‘Skou Building’ located at the heart of the university campus, as well as at Dept of Forensic Medicine, located at Aarhus University Hospital Skejby. You can read more about the department http://biomed.au.dk/en/ and about the faculty http://health.au.dk/en/ .

About the research project
Virus infections lead to immune activation, modulation of cellular activities, and alteration of metabolism. This leads to destruction of tissues and alteration of homeostatic activities, and hence disease development. Therefore, understanding of the mechanisms that govern alterations in metabolism and deciphering of the impact, will advance the understanding of viral disease mechanisms.

To address these questions, we will map the metabolic alterations that occur in virus-infected organs, and experimentally test key observations for functional impact.
For this purpose, we will use mouse models for virus infections (e.g. herpesvirus infections in the brain, and SARS-CoV2 infection in the lungs) and combine this with untargeted LC-MS based metabolomics analysis (LC-QTOF-MS and LC-MS/MS) , advanced complex data analysis tools, and in vitro model systems. This will allow us to both identify and explore metabolic alterations in virus-infected organs. The project is part of a larger program of mapping cellular transcription, activation stages, and metabolic impact with high temporal and spatial resolution, and to include machine leaning tools to uncover complex patterns in viral diseases.

Your job responsibilities
As Postdoc in infection biology and immunology combined with metabolomics your position is primarily research-based but may also involve teaching assignments. You will contribute to the development of the department through research of high international quality. In your daily work, you will work closely with colleagues on your project, where you will receive supervision and guidance. The work related to the project will take place at both Department of Biomedicine (infection biology and immunology, prof. Søren Riis Paludan and assoc prof. Line Reinert) and Department of Forensic Medicine (metabolomics, prof. Mogens Johannsen), and the successful candidate will be integrated into both departments. Your main tasks will consist of: Independent research of high international quality, including publication.

You will report to Professor Søren Riis Paludan tel.: (+45) 28992066.

Your competences
You have academic qualifications at the PhD level, preferably within one or more of the following areas immunology, biochemistry or cell biology, and with strong interest in metabolism. Applicants with previous documented experience with untargeted metabolomics and analysis of complex biological data sets will be preferred. This includes LC-QTOF-MS and LC-MS/MS based metabolomics analysis, metabolic pathway analysis and to lesser extend animal models, and in vitro cell culture systems. You should have solid analytical thinking, creativity, and a visible publication record. We offer a dynamic, ambitious, and productive environment for a young scientist, and a good platform for a future career in frontline research.

Recent publications from the project group:

  • Zhang BC, et al. STEEP mediates STING ER exit and activation of signaling. Nature Immunology. 2020. 21:868-879.
  • Reinert et al. Brain immune cells undergo cGAS/STING-dependent apoptosis during herpes simplex virus type 1 infection to limit type I IFN production. Journal of Clinical Investigation. 2021. 131(1):e136824:
  • Kold-Christensen R, Johannsen M. Methylglyoxal Metabolism and Aging-Related Disease: Moving from Correlation toward Causation. Trends Endocrinol Metab. 2020. 31:81-92.
  • As a person, you are ambitious, take ownership and possess good communication and interpersonal skills. We expect you to be fluent in oral and written English. In order to be assessed as qualified for a Postdoc position, you must meet

    http://health.au.dk/en/about-health/vacant-positions/recruitment-procedu...

    .

    Shortlisting will be used.

    Questions about the position
    If you have any questions about the position, please contact Professor Søren Riis Paludan tel.: (+45) 28992066; email: srp">mailto:srp@biomed.au.dk">srp @biomed.au.dk, or professor Mogens Johannsen email: mj">mailto:mj@forens.au.dk">mj @forens.au.dk.

    We expect to conduct interviews the third week of March.

    Terms of employment


    Application

    Your application must include the following:

    We refer to the faculty’s

    http://health.au.dk/en/about-health/vacant-positions/recruitment-procedu... Guidelines for applicants

    .

    The assessment committee may decide to include non-


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